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Orientation of dti and anatomical data

UserPost

2:08 am
September 20, 2011


rnibbs

Swinburne

Member

posts 6

Hello and thanks for the software. I am getting some spectacular pictures.

We acquire our Siemens Trio DTI data at an oblique axial plane, (so I import directly from DICOM to get the orientation correct). The anatomical T1’s are acquired sagitally. The anatomical images I believe must be NIFTI, and when I import them there orientation is not corrected to the DTI data. Is there a way to fix this, or is it essential to acquire my anatomical data in the same plane as my DTI data?

Thanks for your help

1:10 pm
September 20, 2011


Ruopeng

Admin

posts 406

Regardless what orientation your anatomical data is, it needs to be registered to DTI space before being loaded in TrackVis.

Ruopeng