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9:57 am July 22, 2011
| hsha
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| Member | posts 11 |
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hi
I drew some roi in DTI studio and am trying to open it in trackvis.
if i try to open the roi in trackvis through "new roi from nifti/analyze image" tab it gives me an error saying "cannot load roi from xxxxx.hdr".
any suggestions how i can open the ROIs that i have in analyze format??
thanks,
hsha
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10:30 am July 22, 2011
| Ruopeng
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The ROI file must be a 3D volume with the same dimension and voxel size as the track file. You need to check if the header file contains all the required information.
Ruopeng
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3:24 pm July 22, 2011
| hsha
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| Member | posts 11 |
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Hi Ruopeng,
the roi file is a 3d volume, i can open it in mricron but when i try to open it in trackvis it gives me an error.
i have already transformed the tracks in MNI space. The roi from DTI studio was also drawn on a MNI template brain.
i can upload a roi.hdr if you want to take a look at it?
hsha
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10:58 am July 25, 2011
| Ruopeng
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Sure. If possible, could you also upload the track file and the image file as well (not just the header file)?
Ruopeng
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11:17 am July 26, 2011
| hsha
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| Member | posts 11 |
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Hi Ruopeng,
the attachements on this forum can only be images or movies. i didnt find any other way to attach the .hdr, .img and .trk . is there another way i can email you these files??
thanks,
hsha
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11:29 am August 1, 2011
| Ruopeng
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| posts 406 |
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Forgot to mention, you can sent it from here:
https://www.nmr.mgh.harvard.edu/facility/filedrop/index.html
Please zip everything into one file and use rpwang@nmr.mgh.harvard.edu as my email.
Thanks,
Ruopeng
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